Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Gm11355-201ENSMUST00000121120 306 ntBASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Gm29518-201ENSMUST00000190858 372 ntBASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clcc1Q99LI2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Clcc1Q99LI2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Gm9013-201ENSMUST00000132939 882 ntBASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcc1Q99LI2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Gm27704-201ENSMUST00000185094 107 ntBASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Gm17808-201ENSMUST00000200859 894 ntBASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clcc1Q99LI2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcc1Q99LI2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clcc1Q99LI2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcc1Q99LI2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcc1Q99LI2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcc1Q99LI2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcc1Q99LI2 Gm9103-201ENSMUST00000119371 405 ntBASIC16.68■□□□□ 0.26
Clcc1Q99LI2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.68■□□□□ 0.26
Clcc1Q99LI2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Clcc1Q99LI2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clcc1Q99LI2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcc1Q99LI2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clcc1Q99LI2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.68■□□□□ 0.26
Clcc1Q99LI2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Clcc1Q99LI2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcc1Q99LI2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcc1Q99LI2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.68■□□□□ 0.26
Clcc1Q99LI2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clcc1Q99LI2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Actl10-202ENSMUST00000226583 1501 ntBASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms