Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RtcbQ99LF4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RtcbQ99LF4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RtcbQ99LF4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RtcbQ99LF4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RtcbQ99LF4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.88■□□□□ 0.93
RtcbQ99LF4 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.88■□□□□ 0.93
RtcbQ99LF4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RtcbQ99LF4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RtcbQ99LF4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RtcbQ99LF4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RtcbQ99LF4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RtcbQ99LF4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.87■□□□□ 0.93
RtcbQ99LF4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.87■□□□□ 0.93
RtcbQ99LF4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.87■□□□□ 0.93
RtcbQ99LF4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RtcbQ99LF4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RtcbQ99LF4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RtcbQ99LF4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RtcbQ99LF4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RtcbQ99LF4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RtcbQ99LF4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RtcbQ99LF4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RtcbQ99LF4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RtcbQ99LF4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RtcbQ99LF4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RtcbQ99LF4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RtcbQ99LF4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RtcbQ99LF4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.86■□□□□ 0.93
RtcbQ99LF4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.86■□□□□ 0.93
RtcbQ99LF4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.86■□□□□ 0.93
RtcbQ99LF4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RtcbQ99LF4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RtcbQ99LF4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RtcbQ99LF4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RtcbQ99LF4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RtcbQ99LF4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RtcbQ99LF4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RtcbQ99LF4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RtcbQ99LF4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.85■□□□□ 0.93
RtcbQ99LF4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.85■□□□□ 0.93
RtcbQ99LF4 Gm44430-201ENSMUST00000203376 995 ntBASIC20.85■□□□□ 0.93
RtcbQ99LF4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RtcbQ99LF4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.85■□□□□ 0.93
RtcbQ99LF4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RtcbQ99LF4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RtcbQ99LF4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RtcbQ99LF4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RtcbQ99LF4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RtcbQ99LF4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RtcbQ99LF4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RtcbQ99LF4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RtcbQ99LF4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RtcbQ99LF4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RtcbQ99LF4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.84■□□□□ 0.93
RtcbQ99LF4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RtcbQ99LF4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RtcbQ99LF4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RtcbQ99LF4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RtcbQ99LF4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RtcbQ99LF4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.84■□□□□ 0.93
RtcbQ99LF4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RtcbQ99LF4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RtcbQ99LF4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RtcbQ99LF4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RtcbQ99LF4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RtcbQ99LF4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RtcbQ99LF4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RtcbQ99LF4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RtcbQ99LF4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RtcbQ99LF4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RtcbQ99LF4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RtcbQ99LF4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RtcbQ99LF4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RtcbQ99LF4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.83■□□□□ 0.93
RtcbQ99LF4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.83■□□□□ 0.93
RtcbQ99LF4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RtcbQ99LF4 Mir5126-201ENSMUST00000175513 77 ntBASIC20.83■□□□□ 0.93
RtcbQ99LF4 Gm5264-201ENSMUST00000190584 848 ntBASIC20.83■□□□□ 0.93
RtcbQ99LF4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
RtcbQ99LF4 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.83■□□□□ 0.93
RtcbQ99LF4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RtcbQ99LF4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.83■□□□□ 0.92
RtcbQ99LF4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RtcbQ99LF4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RtcbQ99LF4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.82■□□□□ 0.92
RtcbQ99LF4 Gm11779-201ENSMUST00000118541 368 ntBASIC20.82■□□□□ 0.92
RtcbQ99LF4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
RtcbQ99LF4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RtcbQ99LF4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.82■□□□□ 0.92
RtcbQ99LF4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
RtcbQ99LF4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RtcbQ99LF4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RtcbQ99LF4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.82■□□□□ 0.92
RtcbQ99LF4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RtcbQ99LF4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RtcbQ99LF4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RtcbQ99LF4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RtcbQ99LF4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.81■□□□□ 0.92
RtcbQ99LF4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms