Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col20a1Q923P0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Col20a1Q923P0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col20a1Q923P0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Col20a1Q923P0 Gm29707-201ENSMUST00000196325 491 ntBASIC19.96■□□□□ 0.79
Col20a1Q923P0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col20a1Q923P0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col20a1Q923P0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.96■□□□□ 0.79
Col20a1Q923P0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col20a1Q923P0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.95■□□□□ 0.78
Col20a1Q923P0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col20a1Q923P0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col20a1Q923P0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col20a1Q923P0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col20a1Q923P0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Col20a1Q923P0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.95■□□□□ 0.78
Col20a1Q923P0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Col20a1Q923P0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col20a1Q923P0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col20a1Q923P0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Col20a1Q923P0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col20a1Q923P0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col20a1Q923P0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col20a1Q923P0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col20a1Q923P0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col20a1Q923P0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col20a1Q923P0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col20a1Q923P0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col20a1Q923P0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col20a1Q923P0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Col20a1Q923P0 Gm27741-201ENSMUST00000185060 237 ntBASIC19.94■□□□□ 0.78
Col20a1Q923P0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col20a1Q923P0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.94■□□□□ 0.78
Col20a1Q923P0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Col20a1Q923P0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col20a1Q923P0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col20a1Q923P0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col20a1Q923P0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col20a1Q923P0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col20a1Q923P0 Gm15794-201ENSMUST00000120182 631 ntBASIC19.93■□□□□ 0.78
Col20a1Q923P0 Gm17971-201ENSMUST00000190239 806 ntBASIC19.93■□□□□ 0.78
Col20a1Q923P0 Gm18421-201ENSMUST00000204122 625 ntBASIC19.93■□□□□ 0.78
Col20a1Q923P0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col20a1Q923P0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Col20a1Q923P0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
Col20a1Q923P0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col20a1Q923P0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col20a1Q923P0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col20a1Q923P0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col20a1Q923P0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col20a1Q923P0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Col20a1Q923P0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col20a1Q923P0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col20a1Q923P0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col20a1Q923P0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col20a1Q923P0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.92■□□□□ 0.78
Col20a1Q923P0 Olfr129-201ENSMUST00000122318 993 ntBASIC19.92■□□□□ 0.78
Col20a1Q923P0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col20a1Q923P0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.92■□□□□ 0.78
Col20a1Q923P0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col20a1Q923P0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col20a1Q923P0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Col20a1Q923P0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Col20a1Q923P0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col20a1Q923P0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Col20a1Q923P0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col20a1Q923P0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col20a1Q923P0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.91■□□□□ 0.78
Col20a1Q923P0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col20a1Q923P0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col20a1Q923P0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col20a1Q923P0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col20a1Q923P0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col20a1Q923P0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col20a1Q923P0 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.91■□□□□ 0.78
Col20a1Q923P0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col20a1Q923P0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col20a1Q923P0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col20a1Q923P0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col20a1Q923P0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col20a1Q923P0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col20a1Q923P0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.9■□□□□ 0.78
Col20a1Q923P0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col20a1Q923P0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col20a1Q923P0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Col20a1Q923P0 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.9■□□□□ 0.78
Col20a1Q923P0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col20a1Q923P0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col20a1Q923P0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.9■□□□□ 0.78
Col20a1Q923P0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col20a1Q923P0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col20a1Q923P0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col20a1Q923P0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col20a1Q923P0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Col20a1Q923P0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col20a1Q923P0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col20a1Q923P0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col20a1Q923P0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col20a1Q923P0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col20a1Q923P0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms