Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdha2Q91Y17 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha2Q91Y17 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha2Q91Y17 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha2Q91Y17 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha2Q91Y17 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha2Q91Y17 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdha2Q91Y17 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18■□□□□ 0.47
Pcdha2Q91Y17 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha2Q91Y17 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha2Q91Y17 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha2Q91Y17 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha2Q91Y17 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha2Q91Y17 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18■□□□□ 0.47
Pcdha2Q91Y17 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdha2Q91Y17 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha2Q91Y17 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha2Q91Y17 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha2Q91Y17 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha2Q91Y17 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdha2Q91Y17 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha2Q91Y17 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha2Q91Y17 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdha2Q91Y17 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdha2Q91Y17 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.98■□□□□ 0.47
Pcdha2Q91Y17 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Gm11336-201ENSMUST00000118168 334 ntBASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Gm23634-201ENSMUST00000175071 91 ntBASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Gm37722-201ENSMUST00000193757 208 ntBASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha2Q91Y17 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdha2Q91Y17 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Pcdha2Q91Y17 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.96■□□□□ 0.47
Pcdha2Q91Y17 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdha2Q91Y17 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha2Q91Y17 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha2Q91Y17 Gm11355-201ENSMUST00000121120 306 ntBASIC17.96■□□□□ 0.47
Pcdha2Q91Y17 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdha2Q91Y17 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.96■□□□□ 0.47
Pcdha2Q91Y17 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pcdha2Q91Y17 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha2Q91Y17 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha2Q91Y17 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha2Q91Y17 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha2Q91Y17 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha2Q91Y17 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha2Q91Y17 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms