Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Mir1668-201ENSMUST00000184114 107 ntBASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdha9Q91Y11 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Actl10-202ENSMUST00000226583 1501 ntBASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdha9Q91Y11 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha9Q91Y11 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pcdha9Q91Y11 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha9Q91Y11 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha9Q91Y11 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha9Q91Y11 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha9Q91Y11 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha9Q91Y11 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha9Q91Y11 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha9Q91Y11 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha9Q91Y11 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Pcdha9Q91Y11 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha9Q91Y11 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha9Q91Y11 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha9Q91Y11 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha9Q91Y11 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdha9Q91Y11 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Gm13186-201ENSMUST00000118031 316 ntBASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha9Q91Y11 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Mir7071-201ENSMUST00000184847 69 ntBASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha9Q91Y11 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms