Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhac2Q91Y09 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.31■□□□□ 0.52
Pcdhac2Q91Y09 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhac2Q91Y09 Gm6443-201ENSMUST00000203599 874 ntBASIC18.31■□□□□ 0.52
Pcdhac2Q91Y09 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.31■□□□□ 0.52
Pcdhac2Q91Y09 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhac2Q91Y09 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhac2Q91Y09 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.31■□□□□ 0.52
Pcdhac2Q91Y09 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.31■□□□□ 0.52
Pcdhac2Q91Y09 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pcdhac2Q91Y09 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhac2Q91Y09 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhac2Q91Y09 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhac2Q91Y09 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhac2Q91Y09 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhac2Q91Y09 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhac2Q91Y09 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Gm43514-201ENSMUST00000198852 424 ntBASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Pcdhac2Q91Y09 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhac2Q91Y09 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 Gm10052-201ENSMUST00000168019 960 ntBASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 Gm27867-201ENSMUST00000184778 125 ntBASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 Gm29707-201ENSMUST00000196325 491 ntBASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 Gm7729-201ENSMUST00000050143 801 ntBASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhac2Q91Y09 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac2Q91Y09 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac2Q91Y09 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac2Q91Y09 Gm12644-201ENSMUST00000119935 606 ntBASIC18.27■□□□□ 0.52
Pcdhac2Q91Y09 Gm27525-201ENSMUST00000184465 107 ntBASIC18.27■□□□□ 0.52
Pcdhac2Q91Y09 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.27■□□□□ 0.52
Pcdhac2Q91Y09 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac2Q91Y09 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac2Q91Y09 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac2Q91Y09 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac2Q91Y09 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhac2Q91Y09 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhac2Q91Y09 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.27■□□□□ 0.51
Pcdhac2Q91Y09 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.27■□□□□ 0.51
Pcdhac2Q91Y09 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.27■□□□□ 0.51
Pcdhac2Q91Y09 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhac2Q91Y09 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhac2Q91Y09 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhac2Q91Y09 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.26■□□□□ 0.51
Pcdhac2Q91Y09 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhac2Q91Y09 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhac2Q91Y09 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhac2Q91Y09 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhac2Q91Y09 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhac2Q91Y09 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhac2Q91Y09 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhac2Q91Y09 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdhac2Q91Y09 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhac2Q91Y09 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.26■□□□□ 0.51
Pcdhac2Q91Y09 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Pcdhac2Q91Y09 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms