Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 Gm7153-201ENSMUST00000117092 455 ntBASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 Gm27742-201ENSMUST00000184667 60 ntBASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 Gm45328-201ENSMUST00000210942 917 ntBASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb18Q91Y02 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb18Q91Y02 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb18Q91Y02 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhb18Q91Y02 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb18Q91Y02 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb18Q91Y02 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb18Q91Y02 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Pcdhb18Q91Y02 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb18Q91Y02 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb18Q91Y02 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb18Q91Y02 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb18Q91Y02 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb18Q91Y02 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb18Q91Y02 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Gm7461-201ENSMUST00000058918 827 ntBASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb18Q91Y02 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Gm27357-201ENSMUST00000183754 135 ntBASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms