Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb20Q91XZ9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Gm14667-201ENSMUST00000119448 1350 ntBASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 AC154828.2-201ENSMUST00000220908 1070 ntBASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb20Q91XZ9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Gm14201-201ENSMUST00000117627 289 ntBASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.3■□□□□ 0.2
Pcdhb20Q91XZ9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Gm21559-201ENSMUST00000220638 855 ntBASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Gm8587-201ENSMUST00000076538 843 ntBASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb20Q91XZ9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Gm23634-201ENSMUST00000175071 91 ntBASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Gm43692-201ENSMUST00000198236 1062 ntBASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhb20Q91XZ9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms