Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb6Q91XZ4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb6Q91XZ4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Haglr-201ENSMUST00000100000 2085 ntBASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb6Q91XZ4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Gm11539-201ENSMUST00000119837 557 ntBASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Gm13436-201ENSMUST00000120418 567 ntBASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Gm7370-201ENSMUST00000219471 767 ntBASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb6Q91XZ4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.33■□□□□ 0.37
Pcdhb6Q91XZ4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb6Q91XZ4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb6Q91XZ4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.33■□□□□ 0.36
Pcdhb6Q91XZ4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb6Q91XZ4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.33■□□□□ 0.36
Pcdhb6Q91XZ4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdhb6Q91XZ4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb6Q91XZ4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb6Q91XZ4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb6Q91XZ4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb6Q91XZ4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb6Q91XZ4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb6Q91XZ4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb6Q91XZ4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms