Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Gm13559-201ENSMUST00000120476 863 ntBASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga4Q91XY4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhga4Q91XY4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhga4Q91XY4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Gm11539-201ENSMUST00000119837 557 ntBASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Gm13436-201ENSMUST00000120418 567 ntBASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhga4Q91XY4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Idnk-204ENSMUST00000226010 1898 ntBASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhga4Q91XY4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Gm2274-201ENSMUST00000184539 609 ntBASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Gm9987-201ENSMUST00000069768 567 ntBASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhga4Q91XY4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms