Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga9Q91XX9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Gm18958-201ENSMUST00000174258 762 ntBASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Gm45058-201ENSMUST00000205810 766 ntBASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.73■□□□□ 0.27
Pcdhga9Q91XX9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhga9Q91XX9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Gm2274-201ENSMUST00000184539 609 ntBASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga9Q91XX9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhga9Q91XX9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms