Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.36■□□□□ 0.69
Trex1Q91XB0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trex1Q91XB0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.36■□□□□ 0.69
Trex1Q91XB0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trex1Q91XB0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trex1Q91XB0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trex1Q91XB0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trex1Q91XB0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trex1Q91XB0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.36■□□□□ 0.69
Trex1Q91XB0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trex1Q91XB0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trex1Q91XB0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trex1Q91XB0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.35■□□□□ 0.69
Trex1Q91XB0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trex1Q91XB0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trex1Q91XB0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trex1Q91XB0 Gm8969-201ENSMUST00000199694 526 ntBASIC19.35■□□□□ 0.69
Trex1Q91XB0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.35■□□□□ 0.69
Trex1Q91XB0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trex1Q91XB0 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.35■□□□□ 0.69
Trex1Q91XB0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Trex1Q91XB0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.35■□□□□ 0.69
Trex1Q91XB0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trex1Q91XB0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trex1Q91XB0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trex1Q91XB0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Trex1Q91XB0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trex1Q91XB0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trex1Q91XB0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trex1Q91XB0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.34■□□□□ 0.69
Trex1Q91XB0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trex1Q91XB0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trex1Q91XB0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trex1Q91XB0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trex1Q91XB0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trex1Q91XB0 Gm27459-201ENSMUST00000184860 107 ntBASIC19.34■□□□□ 0.69
Trex1Q91XB0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trex1Q91XB0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trex1Q91XB0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trex1Q91XB0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.34■□□□□ 0.69
Trex1Q91XB0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trex1Q91XB0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trex1Q91XB0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trex1Q91XB0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trex1Q91XB0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trex1Q91XB0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trex1Q91XB0 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.33■□□□□ 0.69
Trex1Q91XB0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trex1Q91XB0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.33■□□□□ 0.68
Trex1Q91XB0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Trex1Q91XB0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.33■□□□□ 0.68
Trex1Q91XB0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trex1Q91XB0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.33■□□□□ 0.68
Trex1Q91XB0 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.33■□□□□ 0.68
Trex1Q91XB0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.33■□□□□ 0.68
Trex1Q91XB0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trex1Q91XB0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trex1Q91XB0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trex1Q91XB0 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.32■□□□□ 0.68
Trex1Q91XB0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trex1Q91XB0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trex1Q91XB0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trex1Q91XB0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trex1Q91XB0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trex1Q91XB0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trex1Q91XB0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trex1Q91XB0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.32■□□□□ 0.68
Trex1Q91XB0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trex1Q91XB0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trex1Q91XB0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.32■□□□□ 0.68
Trex1Q91XB0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.32■□□□□ 0.68
Trex1Q91XB0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trex1Q91XB0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trex1Q91XB0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trex1Q91XB0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trex1Q91XB0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trex1Q91XB0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trex1Q91XB0 Gm44771-201ENSMUST00000206975 626 ntBASIC19.31■□□□□ 0.68
Trex1Q91XB0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.31■□□□□ 0.68
Trex1Q91XB0 Mzt1-203ENSMUST00000227948 952 ntBASIC19.31■□□□□ 0.68
Trex1Q91XB0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trex1Q91XB0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trex1Q91XB0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trex1Q91XB0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trex1Q91XB0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trex1Q91XB0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trex1Q91XB0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trex1Q91XB0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trex1Q91XB0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trex1Q91XB0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.31■□□□□ 0.68
Trex1Q91XB0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trex1Q91XB0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trex1Q91XB0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trex1Q91XB0 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.3■□□□□ 0.68
Trex1Q91XB0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trex1Q91XB0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.3■□□□□ 0.68
Trex1Q91XB0 Gm43347-201ENSMUST00000200226 580 ntBASIC19.3■□□□□ 0.68
Trex1Q91XB0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trex1Q91XB0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trex1Q91XB0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms