Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim60Q8VI40 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim60Q8VI40 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim60Q8VI40 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim60Q8VI40 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim60Q8VI40 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trim60Q8VI40 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Trim60Q8VI40 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim60Q8VI40 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim60Q8VI40 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim60Q8VI40 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim60Q8VI40 Gm20049-201ENSMUST00000219950 730 ntBASIC17.51■□□□□ 0.39
Trim60Q8VI40 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim60Q8VI40 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim60Q8VI40 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trim60Q8VI40 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim60Q8VI40 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim60Q8VI40 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim60Q8VI40 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim60Q8VI40 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim60Q8VI40 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Trim60Q8VI40 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.5■□□□□ 0.39
Trim60Q8VI40 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim60Q8VI40 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim60Q8VI40 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim60Q8VI40 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim60Q8VI40 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim60Q8VI40 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim60Q8VI40 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim60Q8VI40 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.49■□□□□ 0.39
Trim60Q8VI40 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim60Q8VI40 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim60Q8VI40 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim60Q8VI40 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim60Q8VI40 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim60Q8VI40 Gm17661-201ENSMUST00000170317 270 ntBASIC17.49■□□□□ 0.39
Trim60Q8VI40 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim60Q8VI40 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim60Q8VI40 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trim60Q8VI40 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim60Q8VI40 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim60Q8VI40 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim60Q8VI40 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim60Q8VI40 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim60Q8VI40 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.48■□□□□ 0.39
Trim60Q8VI40 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trim60Q8VI40 Gm12441-201ENSMUST00000121806 588 ntBASIC17.48■□□□□ 0.39
Trim60Q8VI40 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.48■□□□□ 0.39
Trim60Q8VI40 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.48■□□□□ 0.39
Trim60Q8VI40 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim60Q8VI40 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim60Q8VI40 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim60Q8VI40 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim60Q8VI40 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim60Q8VI40 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim60Q8VI40 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.47■□□□□ 0.39
Trim60Q8VI40 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim60Q8VI40 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim60Q8VI40 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim60Q8VI40 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim60Q8VI40 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.46■□□□□ 0.39
Trim60Q8VI40 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim60Q8VI40 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim60Q8VI40 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim60Q8VI40 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim60Q8VI40 Gm43183-201ENSMUST00000200632 547 ntBASIC17.46■□□□□ 0.39
Trim60Q8VI40 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim60Q8VI40 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim60Q8VI40 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim60Q8VI40 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim60Q8VI40 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim60Q8VI40 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim60Q8VI40 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim60Q8VI40 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim60Q8VI40 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim60Q8VI40 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim60Q8VI40 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim60Q8VI40 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim60Q8VI40 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms