Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chrna3Q8R4G9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Gm23634-201ENSMUST00000175071 91 ntBASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Gm21559-201ENSMUST00000220638 855 ntBASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Gm8587-201ENSMUST00000076538 843 ntBASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chrna3Q8R4G9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Chrna3Q8R4G9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna3Q8R4G9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna3Q8R4G9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna3Q8R4G9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna3Q8R4G9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna3Q8R4G9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna3Q8R4G9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Chrna3Q8R4G9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna3Q8R4G9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna3Q8R4G9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna3Q8R4G9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna3Q8R4G9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna3Q8R4G9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna3Q8R4G9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna3Q8R4G9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chrna3Q8R4G9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chrna3Q8R4G9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chrna3Q8R4G9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chrna3Q8R4G9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.58■□□□□ 0.25
Chrna3Q8R4G9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Chrna3Q8R4G9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chrna3Q8R4G9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chrna3Q8R4G9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
Chrna3Q8R4G9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chrna3Q8R4G9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chrna3Q8R4G9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chrna3Q8R4G9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chrna3Q8R4G9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chrna3Q8R4G9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Gm27000-201ENSMUST00000182943 842 ntBASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chrna3Q8R4G9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms