Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Slf1Q8R3P9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slf1Q8R3P9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Slf1Q8R3P9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.11■□□□□ 0.33
Slf1Q8R3P9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Slf1Q8R3P9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slf1Q8R3P9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Slf1Q8R3P9 Gm6211-202ENSMUST00000167849 925 ntBASIC17.11■□□□□ 0.33
Slf1Q8R3P9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slf1Q8R3P9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slf1Q8R3P9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slf1Q8R3P9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slf1Q8R3P9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slf1Q8R3P9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slf1Q8R3P9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slf1Q8R3P9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slf1Q8R3P9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slf1Q8R3P9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Gm7291-201ENSMUST00000199147 382 ntBASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slf1Q8R3P9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Slf1Q8R3P9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slf1Q8R3P9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slf1Q8R3P9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Slf1Q8R3P9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.08■□□□□ 0.33
Slf1Q8R3P9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.08■□□□□ 0.32
Slf1Q8R3P9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slf1Q8R3P9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slf1Q8R3P9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.08■□□□□ 0.32
Slf1Q8R3P9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Slf1Q8R3P9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.08■□□□□ 0.32
Slf1Q8R3P9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slf1Q8R3P9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Slf1Q8R3P9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slf1Q8R3P9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slf1Q8R3P9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slf1Q8R3P9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms