Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nudcd3Q8R1N4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Nudcd3Q8R1N4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nudcd3Q8R1N4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nudcd3Q8R1N4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nudcd3Q8R1N4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nudcd3Q8R1N4 Dancr-204ENSMUST00000132389 2347 ntBASIC16.95■□□□□ 0.3
Nudcd3Q8R1N4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nudcd3Q8R1N4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nudcd3Q8R1N4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Gm6576-201ENSMUST00000169678 883 ntBASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Gm26524-201ENSMUST00000192339 390 ntBASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Rab3c-203ENSMUST00000224180 967 ntBASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nudcd3Q8R1N4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nudcd3Q8R1N4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms