Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.93■□□□□ 0.46
Vopp1Q8R1C3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vopp1Q8R1C3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vopp1Q8R1C3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vopp1Q8R1C3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.91■□□□□ 0.46
Vopp1Q8R1C3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vopp1Q8R1C3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vopp1Q8R1C3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Vopp1Q8R1C3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vopp1Q8R1C3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vopp1Q8R1C3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Vopp1Q8R1C3 Gm44430-201ENSMUST00000203376 995 ntBASIC17.91■□□□□ 0.46
Vopp1Q8R1C3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Vopp1Q8R1C3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vopp1Q8R1C3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vopp1Q8R1C3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vopp1Q8R1C3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Vopp1Q8R1C3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vopp1Q8R1C3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vopp1Q8R1C3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vopp1Q8R1C3 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.9■□□□□ 0.46
Vopp1Q8R1C3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.9■□□□□ 0.46
Vopp1Q8R1C3 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.9■□□□□ 0.46
Vopp1Q8R1C3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vopp1Q8R1C3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vopp1Q8R1C3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vopp1Q8R1C3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vopp1Q8R1C3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Vopp1Q8R1C3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vopp1Q8R1C3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vopp1Q8R1C3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vopp1Q8R1C3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vopp1Q8R1C3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vopp1Q8R1C3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.88■□□□□ 0.45
Vopp1Q8R1C3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vopp1Q8R1C3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vopp1Q8R1C3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vopp1Q8R1C3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.88■□□□□ 0.45
Vopp1Q8R1C3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vopp1Q8R1C3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.88■□□□□ 0.45
Vopp1Q8R1C3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vopp1Q8R1C3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vopp1Q8R1C3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Vopp1Q8R1C3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Vopp1Q8R1C3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms