Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3a1Q8K4Z5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.69■□□□□ 0.9
Sf3a1Q8K4Z5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3a1Q8K4Z5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
Sf3a1Q8K4Z5 Gm13474-201ENSMUST00000122466 815 ntBASIC20.69■□□□□ 0.9
Sf3a1Q8K4Z5 Mir5130-201ENSMUST00000175160 84 ntBASIC20.69■□□□□ 0.9
Sf3a1Q8K4Z5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3a1Q8K4Z5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3a1Q8K4Z5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3a1Q8K4Z5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3a1Q8K4Z5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3a1Q8K4Z5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3a1Q8K4Z5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3a1Q8K4Z5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3a1Q8K4Z5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.68■□□□□ 0.9
Sf3a1Q8K4Z5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3a1Q8K4Z5 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.68■□□□□ 0.9
Sf3a1Q8K4Z5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3a1Q8K4Z5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Sf3a1Q8K4Z5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Sf3a1Q8K4Z5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.68■□□□□ 0.9
Sf3a1Q8K4Z5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3a1Q8K4Z5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3a1Q8K4Z5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.68■□□□□ 0.9
Sf3a1Q8K4Z5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a1Q8K4Z5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Gm10231-201ENSMUST00000181584 441 ntBASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Gm10175-202ENSMUST00000208752 441 ntBASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a1Q8K4Z5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3a1Q8K4Z5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3a1Q8K4Z5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.65■□□□□ 0.9
Sf3a1Q8K4Z5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3a1Q8K4Z5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3a1Q8K4Z5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.65■□□□□ 0.9
Sf3a1Q8K4Z5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Sf3a1Q8K4Z5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3a1Q8K4Z5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3a1Q8K4Z5 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3a1Q8K4Z5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3a1Q8K4Z5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Sf3a1Q8K4Z5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Sf3a1Q8K4Z5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sf3a1Q8K4Z5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Sf3a1Q8K4Z5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sf3a1Q8K4Z5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sf3a1Q8K4Z5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sf3a1Q8K4Z5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sf3a1Q8K4Z5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sf3a1Q8K4Z5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.64■□□□□ 0.89
Sf3a1Q8K4Z5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sf3a1Q8K4Z5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sf3a1Q8K4Z5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sf3a1Q8K4Z5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sf3a1Q8K4Z5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sf3a1Q8K4Z5 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Sf3a1Q8K4Z5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.64■□□□□ 0.89
Sf3a1Q8K4Z5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sf3a1Q8K4Z5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.64■□□□□ 0.89
Sf3a1Q8K4Z5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sf3a1Q8K4Z5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Sf3a1Q8K4Z5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms