Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 Gm7506-201ENSMUST00000207758 815 ntBASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ddx54Q8K4L0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx54Q8K4L0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx54Q8K4L0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
Ddx54Q8K4L0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx54Q8K4L0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC22.12■■□□□ 1.13
Ddx54Q8K4L0 Gm27628-201ENSMUST00000184911 107 ntBASIC22.12■■□□□ 1.13
Ddx54Q8K4L0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx54Q8K4L0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx54Q8K4L0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx54Q8K4L0 AV026068-213ENSMUST00000223675 1171 ntBASIC22.12■■□□□ 1.13
Ddx54Q8K4L0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx54Q8K4L0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx54Q8K4L0 Gm5648-201ENSMUST00000122244 1587 ntBASIC22.12■■□□□ 1.13
Ddx54Q8K4L0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ddx54Q8K4L0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx54Q8K4L0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Ddx54Q8K4L0 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.11■■□□□ 1.13
Ddx54Q8K4L0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx54Q8K4L0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx54Q8K4L0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx54Q8K4L0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx54Q8K4L0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx54Q8K4L0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx54Q8K4L0 Gm25911-201ENSMUST00000157621 56 ntBASIC22.11■■□□□ 1.13
Ddx54Q8K4L0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC22.11■■□□□ 1.13
Ddx54Q8K4L0 Gm45683-201ENSMUST00000210825 1247 ntBASIC22.11■■□□□ 1.13
Ddx54Q8K4L0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC22.11■■□□□ 1.13
Ddx54Q8K4L0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx54Q8K4L0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx54Q8K4L0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ddx54Q8K4L0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx54Q8K4L0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx54Q8K4L0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx54Q8K4L0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx54Q8K4L0 Gm43213-201ENSMUST00000151866 1790 ntBASIC22.1■■□□□ 1.13
Ddx54Q8K4L0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx54Q8K4L0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Ddx54Q8K4L0 Gm8097-201ENSMUST00000117903 829 ntBASIC22.1■■□□□ 1.13
Ddx54Q8K4L0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
Ddx54Q8K4L0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC22.1■■□□□ 1.13
Ddx54Q8K4L0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Ddx54Q8K4L0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx54Q8K4L0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx54Q8K4L0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx54Q8K4L0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx54Q8K4L0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ddx54Q8K4L0 Gm5784-201ENSMUST00000179344 2478 ntBASIC22.09■■□□□ 1.13
Ddx54Q8K4L0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx54Q8K4L0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Ddx54Q8K4L0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx54Q8K4L0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx54Q8K4L0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Ddx54Q8K4L0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Ddx54Q8K4L0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Ddx54Q8K4L0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
Ddx54Q8K4L0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx54Q8K4L0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx54Q8K4L0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ddx54Q8K4L0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Ddx54Q8K4L0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Ddx54Q8K4L0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC22.09■■□□□ 1.13
Ddx54Q8K4L0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC22.09■■□□□ 1.13
Ddx54Q8K4L0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Ddx54Q8K4L0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx54Q8K4L0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC22.08■■□□□ 1.13
Ddx54Q8K4L0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx54Q8K4L0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx54Q8K4L0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx54Q8K4L0 Gm6550-201ENSMUST00000187574 993 ntBASIC22.08■■□□□ 1.13
Ddx54Q8K4L0 Gm44430-201ENSMUST00000203376 995 ntBASIC22.08■■□□□ 1.13
Ddx54Q8K4L0 AC158982.1-201ENSMUST00000228377 901 ntBASIC22.08■■□□□ 1.13
Ddx54Q8K4L0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx54Q8K4L0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC22.08■■□□□ 1.13
Ddx54Q8K4L0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx54Q8K4L0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx54Q8K4L0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ddx54Q8K4L0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx54Q8K4L0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Ddx54Q8K4L0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ddx54Q8K4L0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC22.08■■□□□ 1.12
Ddx54Q8K4L0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms