Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Clrn1Q8K445 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.97■□□□□ 0.15
Clrn1Q8K445 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Il3ra-202ENSMUST00000223589 738 ntBASIC15.97■□□□□ 0.15
Clrn1Q8K445 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.97■□□□□ 0.15
Clrn1Q8K445 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.97■□□□□ 0.15
Clrn1Q8K445 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Clrn1Q8K445 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.97■□□□□ 0.15
Clrn1Q8K445 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Clrn1Q8K445 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clrn1Q8K445 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.96■□□□□ 0.15
Clrn1Q8K445 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.96■□□□□ 0.15
Clrn1Q8K445 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.96■□□□□ 0.15
Clrn1Q8K445 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clrn1Q8K445 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clrn1Q8K445 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Clrn1Q8K445 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Clrn1Q8K445 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clrn1Q8K445 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clrn1Q8K445 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.96■□□□□ 0.15
Clrn1Q8K445 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Clrn1Q8K445 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Clrn1Q8K445 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Clrn1Q8K445 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.96■□□□□ 0.14
Clrn1Q8K445 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Clrn1Q8K445 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Clrn1Q8K445 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Gm18958-201ENSMUST00000174258 762 ntBASIC15.95■□□□□ 0.14
Clrn1Q8K445 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.95■□□□□ 0.14
Clrn1Q8K445 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Clrn1Q8K445 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clrn1Q8K445 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clrn1Q8K445 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clrn1Q8K445 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clrn1Q8K445 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clrn1Q8K445 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Clrn1Q8K445 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clrn1Q8K445 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clrn1Q8K445 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clrn1Q8K445 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clrn1Q8K445 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clrn1Q8K445 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.94■□□□□ 0.14
Clrn1Q8K445 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.94■□□□□ 0.14
Clrn1Q8K445 Mir6982-201ENSMUST00000184354 68 ntBASIC15.94■□□□□ 0.14
Clrn1Q8K445 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clrn1Q8K445 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.94■□□□□ 0.14
Clrn1Q8K445 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Clrn1Q8K445 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Clrn1Q8K445 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms