Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfwd3Q8CIK8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Rfwd3Q8CIK8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Rfwd3Q8CIK8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfwd3Q8CIK8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Rfwd3Q8CIK8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfwd3Q8CIK8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Rfwd3Q8CIK8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfwd3Q8CIK8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rfwd3Q8CIK8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rfwd3Q8CIK8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfwd3Q8CIK8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Rfwd3Q8CIK8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rfwd3Q8CIK8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rfwd3Q8CIK8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Rfwd3Q8CIK8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 Gm15565-201ENSMUST00000118890 427 ntBASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rfwd3Q8CIK8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Gm7791-201ENSMUST00000219066 539 ntBASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rfwd3Q8CIK8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
Rfwd3Q8CIK8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Gm11539-201ENSMUST00000119837 557 ntBASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Gm13436-201ENSMUST00000120418 567 ntBASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Gm13559-201ENSMUST00000120476 863 ntBASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.89■□□□□ 0.13
Rfwd3Q8CIK8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rfwd3Q8CIK8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms