Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.04■□□□□ 0.32
Clip4Q8CI96 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Gm10517-202ENSMUST00000192970 758 ntBASIC17.03■□□□□ 0.32
Clip4Q8CI96 Gm29791-202ENSMUST00000207888 369 ntBASIC17.03■□□□□ 0.32
Clip4Q8CI96 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.03■□□□□ 0.32
Clip4Q8CI96 Timm23-208ENSMUST00000226683 750 ntBASIC17.03■□□□□ 0.32
Clip4Q8CI96 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Gm5417-201ENSMUST00000079706 384 ntBASIC17.03■□□□□ 0.32
Clip4Q8CI96 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.03■□□□□ 0.32
Clip4Q8CI96 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.03■□□□□ 0.32
Clip4Q8CI96 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clip4Q8CI96 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.03■□□□□ 0.32
Clip4Q8CI96 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Haglr-201ENSMUST00000100000 2085 ntBASIC17.03■□□□□ 0.32
Clip4Q8CI96 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clip4Q8CI96 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clip4Q8CI96 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.02■□□□□ 0.32
Clip4Q8CI96 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
Clip4Q8CI96 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Clip4Q8CI96 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Odf3b-204ENSMUST00000227834 930 ntBASIC17.02■□□□□ 0.32
Clip4Q8CI96 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clip4Q8CI96 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Clip4Q8CI96 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clip4Q8CI96 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Clip4Q8CI96 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clip4Q8CI96 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clip4Q8CI96 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Mir7071-201ENSMUST00000184847 69 ntBASIC17.01■□□□□ 0.31
Clip4Q8CI96 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clip4Q8CI96 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clip4Q8CI96 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Clip4Q8CI96 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17■□□□□ 0.31
Clip4Q8CI96 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clip4Q8CI96 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clip4Q8CI96 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clip4Q8CI96 Gm5421-201ENSMUST00000181698 2354 ntBASIC17■□□□□ 0.31
Clip4Q8CI96 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Clip4Q8CI96 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17■□□□□ 0.31
Clip4Q8CI96 Gm13401-201ENSMUST00000117074 291 ntBASIC17■□□□□ 0.31
Clip4Q8CI96 Gm20472-201ENSMUST00000174403 1240 ntBASIC17■□□□□ 0.31
Clip4Q8CI96 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17■□□□□ 0.31
Clip4Q8CI96 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clip4Q8CI96 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Clip4Q8CI96 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms