Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Sox30Q8CGW4 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.49■□□□□ 0.55
Sox30Q8CGW4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox30Q8CGW4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox30Q8CGW4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox30Q8CGW4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox30Q8CGW4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox30Q8CGW4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox30Q8CGW4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.49■□□□□ 0.55
Sox30Q8CGW4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sox30Q8CGW4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sox30Q8CGW4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.49■□□□□ 0.55
Sox30Q8CGW4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox30Q8CGW4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sox30Q8CGW4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sox30Q8CGW4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox30Q8CGW4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sox30Q8CGW4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sox30Q8CGW4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.47■□□□□ 0.55
Sox30Q8CGW4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Gm10602-201ENSMUST00000098239 609 ntBASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox30Q8CGW4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Sox30Q8CGW4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sox30Q8CGW4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox30Q8CGW4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Sox30Q8CGW4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sox30Q8CGW4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.45■□□□□ 0.54
Sox30Q8CGW4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox30Q8CGW4 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.45■□□□□ 0.54
Sox30Q8CGW4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox30Q8CGW4 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.45■□□□□ 0.54
Sox30Q8CGW4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox30Q8CGW4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms