Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 AV026068-213ENSMUST00000223675 1171 ntBASIC17.58■□□□□ 0.4
Rp1l1Q8CGM2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Gm27397-201ENSMUST00000184997 107 ntBASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rp1l1Q8CGM2 Gm12497-201ENSMUST00000138778 237 ntBASIC17.56■□□□□ 0.4
Rp1l1Q8CGM2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rp1l1Q8CGM2 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.56■□□□□ 0.4
Rp1l1Q8CGM2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rp1l1Q8CGM2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rp1l1Q8CGM2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rp1l1Q8CGM2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rp1l1Q8CGM2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rp1l1Q8CGM2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rp1l1Q8CGM2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.56■□□□□ 0.4
Rp1l1Q8CGM2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rp1l1Q8CGM2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rp1l1Q8CGM2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rp1l1Q8CGM2 Gm4459-201ENSMUST00000118750 468 ntBASIC17.56■□□□□ 0.4
Rp1l1Q8CGM2 Gm10576-201ENSMUST00000191927 825 ntBASIC17.56■□□□□ 0.4
Rp1l1Q8CGM2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rp1l1Q8CGM2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rp1l1Q8CGM2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rp1l1Q8CGM2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rp1l1Q8CGM2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rp1l1Q8CGM2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rp1l1Q8CGM2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rp1l1Q8CGM2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rp1l1Q8CGM2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.55■□□□□ 0.4
Rp1l1Q8CGM2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rp1l1Q8CGM2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rp1l1Q8CGM2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rp1l1Q8CGM2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rp1l1Q8CGM2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.55■□□□□ 0.4
Rp1l1Q8CGM2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Gm6089-201ENSMUST00000197666 938 ntBASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rp1l1Q8CGM2 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Gm8097-201ENSMUST00000117903 829 ntBASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rp1l1Q8CGM2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.52■□□□□ 0.4
Rp1l1Q8CGM2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rp1l1Q8CGM2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Rp1l1Q8CGM2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.52■□□□□ 0.4
Rp1l1Q8CGM2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rp1l1Q8CGM2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.52■□□□□ 0.4
Rp1l1Q8CGM2 Grk6-206ENSMUST00000224995 2971 ntBASIC17.52■□□□□ 0.4
Rp1l1Q8CGM2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rp1l1Q8CGM2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms