Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.1■□□□□ 0.01
ShfQ8CG80 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.1■□□□□ 0.01
ShfQ8CG80 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShfQ8CG80 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
ShfQ8CG80 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ShfQ8CG80 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ShfQ8CG80 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.09■□□□□ 0.01
ShfQ8CG80 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ShfQ8CG80 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ShfQ8CG80 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ShfQ8CG80 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.09■□□□□ 0.01
ShfQ8CG80 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ShfQ8CG80 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ShfQ8CG80 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ShfQ8CG80 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
ShfQ8CG80 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ShfQ8CG80 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ShfQ8CG80 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ShfQ8CG80 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.08■□□□□ 0
ShfQ8CG80 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.08■□□□□ 0
ShfQ8CG80 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ShfQ8CG80 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.08■□□□□ 0
ShfQ8CG80 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ShfQ8CG80 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ShfQ8CG80 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ShfQ8CG80 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
ShfQ8CG80 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.07■□□□□ 0
ShfQ8CG80 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
ShfQ8CG80 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.07■□□□□ 0
ShfQ8CG80 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.07■□□□□ 0
ShfQ8CG80 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ShfQ8CG80 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.07■□□□□ 0
ShfQ8CG80 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
ShfQ8CG80 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.06■□□□□ 0
ShfQ8CG80 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.06■□□□□ 0
ShfQ8CG80 Gm27000-201ENSMUST00000182943 842 ntBASIC15.06■□□□□ 0
ShfQ8CG80 Gm37856-201ENSMUST00000191634 999 ntBASIC15.06■□□□□ 0
ShfQ8CG80 Gm9731-201ENSMUST00000209480 747 ntBASIC15.06■□□□□ 0
ShfQ8CG80 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.06■□□□□ 0
ShfQ8CG80 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
ShfQ8CG80 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.06■□□□□ 0
ShfQ8CG80 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.05■□□□□ 0
ShfQ8CG80 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
ShfQ8CG80 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms