Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.93■□□□□ 0.94
Smc5Q8CG46 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Gm12441-201ENSMUST00000121806 588 ntBASIC20.93■□□□□ 0.94
Smc5Q8CG46 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc5Q8CG46 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Smc5Q8CG46 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc5Q8CG46 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc5Q8CG46 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC20.91■□□□□ 0.94
Smc5Q8CG46 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smc5Q8CG46 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc5Q8CG46 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.91■□□□□ 0.94
Smc5Q8CG46 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc5Q8CG46 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc5Q8CG46 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Smc5Q8CG46 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc5Q8CG46 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Smc5Q8CG46 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.9■□□□□ 0.94
Smc5Q8CG46 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
Smc5Q8CG46 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Smc5Q8CG46 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Smc5Q8CG46 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc5Q8CG46 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Smc5Q8CG46 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc5Q8CG46 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Smc5Q8CG46 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Smc5Q8CG46 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc5Q8CG46 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc5Q8CG46 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc5Q8CG46 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc5Q8CG46 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smc5Q8CG46 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smc5Q8CG46 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Smc5Q8CG46 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Smc5Q8CG46 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Smc5Q8CG46 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Smc5Q8CG46 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc5Q8CG46 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc5Q8CG46 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Smc5Q8CG46 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.89■□□□□ 0.93
Smc5Q8CG46 Gm10698-201ENSMUST00000182663 604 ntBASIC20.89■□□□□ 0.93
Smc5Q8CG46 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.89■□□□□ 0.93
Smc5Q8CG46 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc5Q8CG46 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc5Q8CG46 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc5Q8CG46 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smc5Q8CG46 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Smc5Q8CG46 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.89■□□□□ 0.93
Smc5Q8CG46 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smc5Q8CG46 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smc5Q8CG46 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc5Q8CG46 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.88■□□□□ 0.93
Smc5Q8CG46 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smc5Q8CG46 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Smc5Q8CG46 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc5Q8CG46 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc5Q8CG46 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC20.88■□□□□ 0.93
Smc5Q8CG46 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Smc5Q8CG46 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Smc5Q8CG46 Gm5643-201ENSMUST00000117081 966 ntBASIC20.88■□□□□ 0.93
Smc5Q8CG46 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc5Q8CG46 Gm9731-201ENSMUST00000209480 747 ntBASIC20.88■□□□□ 0.93
Smc5Q8CG46 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms