Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nup88Q8CEC0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nup88Q8CEC0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Gm13401-201ENSMUST00000117074 291 ntBASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Gm6659-201ENSMUST00000174752 547 ntBASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup88Q8CEC0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Nup88Q8CEC0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup88Q8CEC0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup88Q8CEC0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup88Q8CEC0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup88Q8CEC0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Nup88Q8CEC0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup88Q8CEC0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup88Q8CEC0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup88Q8CEC0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup88Q8CEC0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Nup88Q8CEC0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup88Q8CEC0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup88Q8CEC0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup88Q8CEC0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Nup88Q8CEC0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nup88Q8CEC0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup88Q8CEC0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup88Q8CEC0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup88Q8CEC0 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.91■□□□□ 0.78
Nup88Q8CEC0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup88Q8CEC0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup88Q8CEC0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup88Q8CEC0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup88Q8CEC0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup88Q8CEC0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Nup88Q8CEC0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nup88Q8CEC0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Nup88Q8CEC0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nup88Q8CEC0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Nup88Q8CEC0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.89■□□□□ 0.77
Nup88Q8CEC0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nup88Q8CEC0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.89■□□□□ 0.77
Nup88Q8CEC0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms