Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb7Q8CDY9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb7Q8CDY9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb7Q8CDY9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb7Q8CDY9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pcdhb7Q8CDY9 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Pcdhb7Q8CDY9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.99■□□□□ 0.31
Pcdhb7Q8CDY9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb7Q8CDY9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb7Q8CDY9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb7Q8CDY9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.99■□□□□ 0.31
Pcdhb7Q8CDY9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb7Q8CDY9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb7Q8CDY9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb7Q8CDY9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb7Q8CDY9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb7Q8CDY9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Haglr-201ENSMUST00000100000 2085 ntBASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb7Q8CDY9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb7Q8CDY9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Mir1199-201ENSMUST00000117015 119 ntBASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Gm10812-201ENSMUST00000099864 546 ntBASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb7Q8CDY9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb7Q8CDY9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Pcdhb7Q8CDY9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb7Q8CDY9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb7Q8CDY9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb7Q8CDY9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb7Q8CDY9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb7Q8CDY9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb7Q8CDY9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb7Q8CDY9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb7Q8CDY9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb7Q8CDY9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb7Q8CDY9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb7Q8CDY9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb7Q8CDY9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb7Q8CDY9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Pcdhb7Q8CDY9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb7Q8CDY9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb7Q8CDY9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms