Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Gm4974-201ENSMUST00000209974 875 ntBASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nhlrc3Q8CCH2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nhlrc3Q8CCH2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Gm10602-201ENSMUST00000098239 609 ntBASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.23□□□□□ -0.13
Nhlrc3Q8CCH2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nhlrc3Q8CCH2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Nhlrc3Q8CCH2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.22□□□□□ -0.13
Nhlrc3Q8CCH2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nhlrc3Q8CCH2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.22□□□□□ -0.13
Nhlrc3Q8CCH2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.22□□□□□ -0.13
Nhlrc3Q8CCH2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nhlrc3Q8CCH2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nhlrc3Q8CCH2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nhlrc3Q8CCH2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nhlrc3Q8CCH2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nhlrc3Q8CCH2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nhlrc3Q8CCH2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms