Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Alx1Q8C8B0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Alx1Q8C8B0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Alx1Q8C8B0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Alx1Q8C8B0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Alx1Q8C8B0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Alx1Q8C8B0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Gm25016-201ENSMUST00000158399 131 ntBASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Alx1Q8C8B0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alx1Q8C8B0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Alx1Q8C8B0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Alx1Q8C8B0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alx1Q8C8B0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Alx1Q8C8B0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alx1Q8C8B0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Alx1Q8C8B0 Gm6345-202ENSMUST00000180900 204 ntBASIC19.72■□□□□ 0.75
Alx1Q8C8B0 Gm29707-201ENSMUST00000196325 491 ntBASIC19.72■□□□□ 0.75
Alx1Q8C8B0 Gm18421-201ENSMUST00000204122 625 ntBASIC19.72■□□□□ 0.75
Alx1Q8C8B0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alx1Q8C8B0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alx1Q8C8B0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alx1Q8C8B0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alx1Q8C8B0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Alx1Q8C8B0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alx1Q8C8B0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alx1Q8C8B0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alx1Q8C8B0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Alx1Q8C8B0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Alx1Q8C8B0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Alx1Q8C8B0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Alx1Q8C8B0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Alx1Q8C8B0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Alx1Q8C8B0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Alx1Q8C8B0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Alx1Q8C8B0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Alx1Q8C8B0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Alx1Q8C8B0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Alx1Q8C8B0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Alx1Q8C8B0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Alx1Q8C8B0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Alx1Q8C8B0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Alx1Q8C8B0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alx1Q8C8B0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.69■□□□□ 0.74
Alx1Q8C8B0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Alx1Q8C8B0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Alx1Q8C8B0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.69■□□□□ 0.74
Alx1Q8C8B0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Alx1Q8C8B0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms