Protein–RNA interactions for Protein: Q8C7E9

Cstf2t, Cleavage stimulation factor subunit 2 tau variant, mousemouse

Known RBP Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2tQ8C7E9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
Cstf2tQ8C7E9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cstf2tQ8C7E9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.27■□□□□ 0.35
Cstf2tQ8C7E9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.27■□□□□ 0.35
Cstf2tQ8C7E9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cstf2tQ8C7E9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cstf2tQ8C7E9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.25■□□□□ 0.35
Cstf2tQ8C7E9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 Gm24841-201ENSMUST00000158676 357 ntBASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 Mir5131-201ENSMUST00000175426 93 ntBASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cstf2tQ8C7E9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Gm23935-201ENSMUST00000102303 57 ntBASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Gm24270-201ENSMUST00000102326 57 ntBASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Gm24245-201ENSMUST00000157318 57 ntBASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Auts2-212ENSMUST00000178555 309 ntBASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cstf2tQ8C7E9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cstf2tQ8C7E9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cstf2tQ8C7E9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cstf2tQ8C7E9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms