Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Lin9Q8C735 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Lin9Q8C735 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lin9Q8C735 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lin9Q8C735 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lin9Q8C735 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.5■□□□□ 0.55
Lin9Q8C735 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lin9Q8C735 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Lin9Q8C735 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lin9Q8C735 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.49■□□□□ 0.55
Lin9Q8C735 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lin9Q8C735 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lin9Q8C735 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Lin9Q8C735 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lin9Q8C735 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lin9Q8C735 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lin9Q8C735 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.49■□□□□ 0.55
Lin9Q8C735 Gm38027-201ENSMUST00000192315 235 ntBASIC18.49■□□□□ 0.55
Lin9Q8C735 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.49■□□□□ 0.55
Lin9Q8C735 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.49■□□□□ 0.55
Lin9Q8C735 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Lin9Q8C735 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lin9Q8C735 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Lin9Q8C735 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Lin9Q8C735 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lin9Q8C735 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lin9Q8C735 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lin9Q8C735 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Lin9Q8C735 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin9Q8C735 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin9Q8C735 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin9Q8C735 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin9Q8C735 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Lin9Q8C735 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.48■□□□□ 0.55
Lin9Q8C735 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Lin9Q8C735 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin9Q8C735 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin9Q8C735 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin9Q8C735 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin9Q8C735 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Lin9Q8C735 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin9Q8C735 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin9Q8C735 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin9Q8C735 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin9Q8C735 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin9Q8C735 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin9Q8C735 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lin9Q8C735 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Lin9Q8C735 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin9Q8C735 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin9Q8C735 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin9Q8C735 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin9Q8C735 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin9Q8C735 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lin9Q8C735 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin9Q8C735 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Lin9Q8C735 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lin9Q8C735 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.47■□□□□ 0.55
Lin9Q8C735 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.47■□□□□ 0.55
Lin9Q8C735 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lin9Q8C735 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.47■□□□□ 0.55
Lin9Q8C735 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin9Q8C735 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin9Q8C735 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin9Q8C735 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin9Q8C735 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lin9Q8C735 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Lin9Q8C735 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Lin9Q8C735 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Lin9Q8C735 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Lin9Q8C735 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.46■□□□□ 0.55
Lin9Q8C735 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lin9Q8C735 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lin9Q8C735 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lin9Q8C735 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lin9Q8C735 Gm10013-201ENSMUST00000106074 672 ntBASIC18.46■□□□□ 0.55
Lin9Q8C735 Gm45058-201ENSMUST00000205810 766 ntBASIC18.46■□□□□ 0.55
Lin9Q8C735 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.46■□□□□ 0.55
Lin9Q8C735 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.46■□□□□ 0.55
Lin9Q8C735 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lin9Q8C735 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lin9Q8C735 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.46■□□□□ 0.55
Lin9Q8C735 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Lin9Q8C735 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lin9Q8C735 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lin9Q8C735 Gm2274-201ENSMUST00000184539 609 ntBASIC18.45■□□□□ 0.54
Lin9Q8C735 Gm21362-201ENSMUST00000194272 928 ntBASIC18.45■□□□□ 0.54
Lin9Q8C735 Gm37025-201ENSMUST00000195159 829 ntBASIC18.45■□□□□ 0.54
Lin9Q8C735 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lin9Q8C735 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lin9Q8C735 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lin9Q8C735 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Lin9Q8C735 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lin9Q8C735 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Lin9Q8C735 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Lin9Q8C735 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lin9Q8C735 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lin9Q8C735 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lin9Q8C735 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lin9Q8C735 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms