Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cps1Q8C196 AC154527.4-201ENSMUST00000224364 1667 ntBASIC22.77■■□□□ 1.24
Cps1Q8C196 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Cps1Q8C196 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cps1Q8C196 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cps1Q8C196 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cps1Q8C196 Gm15173-201ENSMUST00000122049 433 ntBASIC22.77■■□□□ 1.24
Cps1Q8C196 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cps1Q8C196 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cps1Q8C196 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC22.77■■□□□ 1.24
Cps1Q8C196 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC22.77■■□□□ 1.24
Cps1Q8C196 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.23
Cps1Q8C196 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cps1Q8C196 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cps1Q8C196 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Cps1Q8C196 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC22.76■■□□□ 1.23
Cps1Q8C196 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC22.76■■□□□ 1.23
Cps1Q8C196 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
Cps1Q8C196 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC22.76■■□□□ 1.23
Cps1Q8C196 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC22.76■■□□□ 1.23
Cps1Q8C196 Gm27702-201ENSMUST00000184512 56 ntBASIC22.76■■□□□ 1.23
Cps1Q8C196 Gm8969-201ENSMUST00000199694 526 ntBASIC22.76■■□□□ 1.23
Cps1Q8C196 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Cps1Q8C196 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cps1Q8C196 AC127349.1-201ENSMUST00000224590 266 ntBASIC22.76■■□□□ 1.23
Cps1Q8C196 AC159093.1-201ENSMUST00000227779 380 ntBASIC22.76■■□□□ 1.23
Cps1Q8C196 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC22.76■■□□□ 1.23
Cps1Q8C196 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cps1Q8C196 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cps1Q8C196 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cps1Q8C196 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cps1Q8C196 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cps1Q8C196 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cps1Q8C196 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cps1Q8C196 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC22.75■■□□□ 1.23
Cps1Q8C196 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC22.75■■□□□ 1.23
Cps1Q8C196 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cps1Q8C196 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cps1Q8C196 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cps1Q8C196 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cps1Q8C196 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cps1Q8C196 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cps1Q8C196 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cps1Q8C196 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cps1Q8C196 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cps1Q8C196 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Cps1Q8C196 Gm9889-202ENSMUST00000206983 1577 ntBASIC22.74■■□□□ 1.23
Cps1Q8C196 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cps1Q8C196 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cps1Q8C196 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cps1Q8C196 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cps1Q8C196 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Cps1Q8C196 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Cps1Q8C196 Gm8097-201ENSMUST00000117903 829 ntBASIC22.73■■□□□ 1.23
Cps1Q8C196 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC22.73■■□□□ 1.23
Cps1Q8C196 Gm5264-201ENSMUST00000190584 848 ntBASIC22.73■■□□□ 1.23
Cps1Q8C196 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Cps1Q8C196 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cps1Q8C196 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Cps1Q8C196 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Cps1Q8C196 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cps1Q8C196 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Cps1Q8C196 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cps1Q8C196 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cps1Q8C196 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cps1Q8C196 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Cps1Q8C196 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
Cps1Q8C196 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Cps1Q8C196 Gm6550-201ENSMUST00000187574 993 ntBASIC22.72■■□□□ 1.23
Cps1Q8C196 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC22.72■■□□□ 1.23
Cps1Q8C196 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC22.72■■□□□ 1.23
Cps1Q8C196 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cps1Q8C196 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cps1Q8C196 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cps1Q8C196 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cps1Q8C196 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Cps1Q8C196 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Cps1Q8C196 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Cps1Q8C196 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
Cps1Q8C196 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cps1Q8C196 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC22.72■■□□□ 1.23
Cps1Q8C196 Gm14140-201ENSMUST00000119999 995 ntBASIC22.72■■□□□ 1.23
Cps1Q8C196 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cps1Q8C196 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cps1Q8C196 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cps1Q8C196 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC22.71■■□□□ 1.23
Cps1Q8C196 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC22.71■■□□□ 1.23
Cps1Q8C196 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Cps1Q8C196 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cps1Q8C196 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC22.71■■□□□ 1.23
Cps1Q8C196 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC22.71■■□□□ 1.23
Cps1Q8C196 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC22.71■■□□□ 1.23
Cps1Q8C196 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cps1Q8C196 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Cps1Q8C196 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.23
Cps1Q8C196 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cps1Q8C196 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Cps1Q8C196 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cps1Q8C196 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cps1Q8C196 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms