Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf3Q8C120 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf3Q8C120 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf3Q8C120 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf3Q8C120 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3rf3Q8C120 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3rf3Q8C120 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3rf3Q8C120 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sh3rf3Q8C120 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3rf3Q8C120 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.58■□□□□ 0.41
Sh3rf3Q8C120 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3rf3Q8C120 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3rf3Q8C120 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sh3rf3Q8C120 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3rf3Q8C120 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3rf3Q8C120 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.58■□□□□ 0.4
Sh3rf3Q8C120 Gm10252-201ENSMUST00000209541 832 ntBASIC17.58■□□□□ 0.4
Sh3rf3Q8C120 Il3ra-202ENSMUST00000223589 738 ntBASIC17.58■□□□□ 0.4
Sh3rf3Q8C120 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Sh3rf3Q8C120 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.58■□□□□ 0.4
Sh3rf3Q8C120 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Sh3rf3Q8C120 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3rf3Q8C120 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3rf3Q8C120 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3rf3Q8C120 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sh3rf3Q8C120 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3rf3Q8C120 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sh3rf3Q8C120 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3rf3Q8C120 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3rf3Q8C120 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.57■□□□□ 0.4
Sh3rf3Q8C120 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.57■□□□□ 0.4
Sh3rf3Q8C120 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.57■□□□□ 0.4
Sh3rf3Q8C120 Gm27000-201ENSMUST00000182943 842 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms