Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp40Q8BWR4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp40Q8BWR4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp40Q8BWR4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Usp40Q8BWR4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Usp40Q8BWR4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Usp40Q8BWR4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
Usp40Q8BWR4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC23.17■■□□□ 1.3
Usp40Q8BWR4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Usp40Q8BWR4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp40Q8BWR4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp40Q8BWR4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp40Q8BWR4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp40Q8BWR4 Gfra2-202ENSMUST00000227633 1480 ntBASIC23.17■■□□□ 1.3
Usp40Q8BWR4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC23.17■■□□□ 1.3
Usp40Q8BWR4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp40Q8BWR4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp40Q8BWR4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp40Q8BWR4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp40Q8BWR4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp40Q8BWR4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC23.16■■□□□ 1.3
Usp40Q8BWR4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC23.16■■□□□ 1.3
Usp40Q8BWR4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC23.16■■□□□ 1.3
Usp40Q8BWR4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Usp40Q8BWR4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp40Q8BWR4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC23.16■■□□□ 1.3
Usp40Q8BWR4 AC153889.1-201ENSMUST00000219257 330 ntBASIC23.16■■□□□ 1.3
Usp40Q8BWR4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
Usp40Q8BWR4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp40Q8BWR4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Usp40Q8BWR4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp40Q8BWR4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp40Q8BWR4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Usp40Q8BWR4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Usp40Q8BWR4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Usp40Q8BWR4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Usp40Q8BWR4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Usp40Q8BWR4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Usp40Q8BWR4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Usp40Q8BWR4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
Usp40Q8BWR4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC23.15■■□□□ 1.3
Usp40Q8BWR4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC23.15■■□□□ 1.3
Usp40Q8BWR4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC23.15■■□□□ 1.3
Usp40Q8BWR4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC23.15■■□□□ 1.3
Usp40Q8BWR4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC23.15■■□□□ 1.3
Usp40Q8BWR4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Usp40Q8BWR4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Usp40Q8BWR4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC23.15■■□□□ 1.3
Usp40Q8BWR4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Usp40Q8BWR4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Usp40Q8BWR4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Usp40Q8BWR4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Usp40Q8BWR4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Usp40Q8BWR4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Usp40Q8BWR4 Gm43182-201ENSMUST00000199476 2528 ntBASIC23.14■■□□□ 1.3
Usp40Q8BWR4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC23.14■■□□□ 1.29
Usp40Q8BWR4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Usp40Q8BWR4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC23.14■■□□□ 1.29
Usp40Q8BWR4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC23.14■■□□□ 1.29
Usp40Q8BWR4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC23.14■■□□□ 1.29
Usp40Q8BWR4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Usp40Q8BWR4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Usp40Q8BWR4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Usp40Q8BWR4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Usp40Q8BWR4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Usp40Q8BWR4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Usp40Q8BWR4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC23.13■■□□□ 1.29
Usp40Q8BWR4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Usp40Q8BWR4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Usp40Q8BWR4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC23.13■■□□□ 1.29
Usp40Q8BWR4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Usp40Q8BWR4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC23.13■■□□□ 1.29
Usp40Q8BWR4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Usp40Q8BWR4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Usp40Q8BWR4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Usp40Q8BWR4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Usp40Q8BWR4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Usp40Q8BWR4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Usp40Q8BWR4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC23.12■■□□□ 1.29
Usp40Q8BWR4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Usp40Q8BWR4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp40Q8BWR4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC23.12■■□□□ 1.29
Usp40Q8BWR4 Gm27459-201ENSMUST00000184860 107 ntBASIC23.12■■□□□ 1.29
Usp40Q8BWR4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp40Q8BWR4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp40Q8BWR4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp40Q8BWR4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp40Q8BWR4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp40Q8BWR4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp40Q8BWR4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Usp40Q8BWR4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Usp40Q8BWR4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp40Q8BWR4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp40Q8BWR4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp40Q8BWR4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Usp40Q8BWR4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Usp40Q8BWR4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp40Q8BWR4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp40Q8BWR4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC23.11■■□□□ 1.29
Usp40Q8BWR4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms