Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm11539-201ENSMUST00000119837 557 ntBASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Gm13436-201ENSMUST00000120418 567 ntBASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Gm10252-201ENSMUST00000209541 832 ntBASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Usp43Q8BUM9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp43Q8BUM9 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Gm13216-201ENSMUST00000117145 591 ntBASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp43Q8BUM9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Gm13559-201ENSMUST00000120476 863 ntBASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Gm7370-201ENSMUST00000219471 767 ntBASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp43Q8BUM9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp43Q8BUM9 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.08■□□□□ 0.33
Usp43Q8BUM9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp43Q8BUM9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp43Q8BUM9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp43Q8BUM9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp43Q8BUM9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp43Q8BUM9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Usp43Q8BUM9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Usp43Q8BUM9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp43Q8BUM9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp43Q8BUM9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp43Q8BUM9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp43Q8BUM9 Gm2274-201ENSMUST00000184539 609 ntBASIC17.08■□□□□ 0.32
Usp43Q8BUM9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Usp43Q8BUM9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp43Q8BUM9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp43Q8BUM9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp43Q8BUM9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Usp43Q8BUM9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Usp43Q8BUM9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp43Q8BUM9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Usp43Q8BUM9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Usp43Q8BUM9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp43Q8BUM9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp43Q8BUM9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Usp43Q8BUM9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms