Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubr7Q8BU04 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.07■□□□□ 0.32
Ubr7Q8BU04 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr7Q8BU04 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.07■□□□□ 0.32
Ubr7Q8BU04 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr7Q8BU04 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr7Q8BU04 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Ubr7Q8BU04 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr7Q8BU04 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr7Q8BU04 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr7Q8BU04 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr7Q8BU04 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr7Q8BU04 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr7Q8BU04 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.07■□□□□ 0.32
Ubr7Q8BU04 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr7Q8BU04 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ubr7Q8BU04 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr7Q8BU04 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr7Q8BU04 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr7Q8BU04 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ubr7Q8BU04 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubr7Q8BU04 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Gm7284-201ENSMUST00000131667 944 ntBASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ubr7Q8BU04 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Gm6623-201ENSMUST00000173570 544 ntBASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Gm27704-201ENSMUST00000185094 107 ntBASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
Ubr7Q8BU04 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.03■□□□□ 0.32
Ubr7Q8BU04 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr7Q8BU04 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr7Q8BU04 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr7Q8BU04 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.02■□□□□ 0.32
Ubr7Q8BU04 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ubr7Q8BU04 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms