Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm17808-201ENSMUST00000200859 894 ntBASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdk5rap1Q8BTW8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Gm10819-201ENSMUST00000099988 561 ntBASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdk5rap1Q8BTW8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Gm11950-201ENSMUST00000121615 838 ntBASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdk5rap1Q8BTW8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap1Q8BTW8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap1Q8BTW8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap1Q8BTW8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap1Q8BTW8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap1Q8BTW8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Cdk5rap1Q8BTW8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.02■□□□□ 0.16
Cdk5rap1Q8BTW8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cdk5rap1Q8BTW8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap1Q8BTW8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap1Q8BTW8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap1Q8BTW8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap1Q8BTW8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cdk5rap1Q8BTW8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdk5rap1Q8BTW8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdk5rap1Q8BTW8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdk5rap1Q8BTW8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdk5rap1Q8BTW8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdk5rap1Q8BTW8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.01■□□□□ 0.15
Cdk5rap1Q8BTW8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cdk5rap1Q8BTW8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms