Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cc2d1bQ8BRN9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cc2d1bQ8BRN9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cc2d1bQ8BRN9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cc2d1bQ8BRN9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cc2d1bQ8BRN9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cc2d1bQ8BRN9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Gm38027-201ENSMUST00000192315 235 ntBASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cc2d1bQ8BRN9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 Gm22240-201ENSMUST00000175225 82 ntBASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cc2d1bQ8BRN9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Cc2d1bQ8BRN9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cc2d1bQ8BRN9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cc2d1bQ8BRN9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cc2d1bQ8BRN9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cc2d1bQ8BRN9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cc2d1bQ8BRN9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cc2d1bQ8BRN9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cc2d1bQ8BRN9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cc2d1bQ8BRN9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cc2d1bQ8BRN9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.65■□□□□ 0.58
Cc2d1bQ8BRN9 Gm9731-201ENSMUST00000209480 747 ntBASIC18.65■□□□□ 0.58
Cc2d1bQ8BRN9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms