Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col16a1Q8BLX7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Col16a1Q8BLX7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
Col16a1Q8BLX7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC22.17■■□□□ 1.14
Col16a1Q8BLX7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Col16a1Q8BLX7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col16a1Q8BLX7 Gm15442-201ENSMUST00000117905 1527 ntBASIC22.17■■□□□ 1.14
Col16a1Q8BLX7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col16a1Q8BLX7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Col16a1Q8BLX7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Col16a1Q8BLX7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC22.17■■□□□ 1.14
Col16a1Q8BLX7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col16a1Q8BLX7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Col16a1Q8BLX7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Col16a1Q8BLX7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Col16a1Q8BLX7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Col16a1Q8BLX7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Col16a1Q8BLX7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Col16a1Q8BLX7 Gm7230-201ENSMUST00000173026 815 ntBASIC22.14■■□□□ 1.13
Col16a1Q8BLX7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col16a1Q8BLX7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC22.14■■□□□ 1.13
Col16a1Q8BLX7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC22.14■■□□□ 1.13
Col16a1Q8BLX7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col16a1Q8BLX7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col16a1Q8BLX7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Col16a1Q8BLX7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC22.14■■□□□ 1.13
Col16a1Q8BLX7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col16a1Q8BLX7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Col16a1Q8BLX7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC22.13■■□□□ 1.13
Col16a1Q8BLX7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col16a1Q8BLX7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col16a1Q8BLX7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col16a1Q8BLX7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Col16a1Q8BLX7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col16a1Q8BLX7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Gm15467-201ENSMUST00000120582 445 ntBASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Gm23935-201ENSMUST00000102303 57 ntBASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Gm24270-201ENSMUST00000102326 57 ntBASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Gm24245-201ENSMUST00000157318 57 ntBASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Gm43575-201ENSMUST00000196420 516 ntBASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col16a1Q8BLX7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms