Protein–RNA interactions for Protein: Q8BK63

Csnk1a1, Casein kinase I isoform alpha, mousemouse

Known RBP Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1a1Q8BK63 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Csnk1a1Q8BK63 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Csnk1a1Q8BK63 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.05■□□□□ 0
Csnk1a1Q8BK63 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.05■□□□□ -0
Csnk1a1Q8BK63 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Il3ra-202ENSMUST00000223589 738 ntBASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Gm5417-201ENSMUST00000079706 384 ntBASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Csnk1a1Q8BK63 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Gm27463-201ENSMUST00000183569 57 ntBASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Gm7791-201ENSMUST00000219066 539 ntBASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Csnk1a1Q8BK63 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Gm37055-201ENSMUST00000191866 133 ntBASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Csnk1a1Q8BK63 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.02■□□□□ -0
Csnk1a1Q8BK63 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.02■□□□□ -0
Csnk1a1Q8BK63 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.02■□□□□ -0
Csnk1a1Q8BK63 Gm18958-201ENSMUST00000174258 762 ntBASIC15.02■□□□□ -0
Csnk1a1Q8BK63 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.02■□□□□ -0
Csnk1a1Q8BK63 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Csnk1a1Q8BK63 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.02■□□□□ -0
Csnk1a1Q8BK63 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.02■□□□□ -0
Csnk1a1Q8BK63 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Csnk1a1Q8BK63 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Csnk1a1Q8BK63 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Csnk1a1Q8BK63 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Csnk1a1Q8BK63 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Csnk1a1Q8BK63 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Csnk1a1Q8BK63 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Csnk1a1Q8BK63 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Csnk1a1Q8BK63 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Csnk1a1Q8BK63 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Csnk1a1Q8BK63 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms