Protein–RNA interactions for Protein: Q80ZI6

Lrsam1, E3 ubiquitin-protein ligase LRSAM1, mousemouse

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrsam1Q80ZI6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrsam1Q80ZI6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Lrsam1Q80ZI6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Lrsam1Q80ZI6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrsam1Q80ZI6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrsam1Q80ZI6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lrsam1Q80ZI6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrsam1Q80ZI6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrsam1Q80ZI6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrsam1Q80ZI6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrsam1Q80ZI6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrsam1Q80ZI6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrsam1Q80ZI6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrsam1Q80ZI6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.37■□□□□ 0.53
Lrsam1Q80ZI6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrsam1Q80ZI6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Gm11249-201ENSMUST00000117071 859 ntBASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Gm13216-201ENSMUST00000117145 591 ntBASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Gm6433-201ENSMUST00000118634 875 ntBASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Gm43799-201ENSMUST00000201845 579 ntBASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrsam1Q80ZI6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrsam1Q80ZI6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Mir1199-201ENSMUST00000117015 119 ntBASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrsam1Q80ZI6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrsam1Q80ZI6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrsam1Q80ZI6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrsam1Q80ZI6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrsam1Q80ZI6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrsam1Q80ZI6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lrsam1Q80ZI6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lrsam1Q80ZI6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Lrsam1Q80ZI6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Lrsam1Q80ZI6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 577.9 ms