Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 AA414768-201ENSMUST00000121924 1257 ntBASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lrrtm4Q80XG9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lrrtm4Q80XG9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Lrrtm4Q80XG9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Lrrtm4Q80XG9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrrtm4Q80XG9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Gm11355-201ENSMUST00000121120 306 ntBASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrtm4Q80XG9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Lrrtm4Q80XG9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrtm4Q80XG9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Lrrtm4Q80XG9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrtm4Q80XG9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrtm4Q80XG9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrtm4Q80XG9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrtm4Q80XG9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrtm4Q80XG9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrtm4Q80XG9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrtm4Q80XG9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Lrrtm4Q80XG9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 175.7 ms