Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp6nlQ80XC3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp6nlQ80XC3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp6nlQ80XC3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.64■□□□□ 0.57
Usp6nlQ80XC3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Usp6nlQ80XC3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp6nlQ80XC3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 Gm29707-201ENSMUST00000196325 491 ntBASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp6nlQ80XC3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 AW822252-206ENSMUST00000208904 237 ntBASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Usp6nlQ80XC3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp6nlQ80XC3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp6nlQ80XC3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp6nlQ80XC3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.61■□□□□ 0.57
Usp6nlQ80XC3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp6nlQ80XC3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp6nlQ80XC3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp6nlQ80XC3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp6nlQ80XC3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp6nlQ80XC3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.61■□□□□ 0.57
Usp6nlQ80XC3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.61■□□□□ 0.57
Usp6nlQ80XC3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp6nlQ80XC3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.6■□□□□ 0.57
Usp6nlQ80XC3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp6nlQ80XC3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Usp6nlQ80XC3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp6nlQ80XC3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Usp6nlQ80XC3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Usp6nlQ80XC3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Usp6nlQ80XC3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.6■□□□□ 0.57
Usp6nlQ80XC3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp6nlQ80XC3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Usp6nlQ80XC3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Usp6nlQ80XC3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp6nlQ80XC3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Usp6nlQ80XC3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Gm18421-201ENSMUST00000204122 625 ntBASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.59■□□□□ 0.57
Usp6nlQ80XC3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp6nlQ80XC3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp6nlQ80XC3 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.58■□□□□ 0.57
Usp6nlQ80XC3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp6nlQ80XC3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp6nlQ80XC3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Usp6nlQ80XC3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
Usp6nlQ80XC3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Usp6nlQ80XC3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Usp6nlQ80XC3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.58■□□□□ 0.56
Usp6nlQ80XC3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.58■□□□□ 0.56
Usp6nlQ80XC3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp6nlQ80XC3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp6nlQ80XC3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.58■□□□□ 0.56
Usp6nlQ80XC3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp6nlQ80XC3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms