Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3tc2Q80VA5 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.39■□□□□ 0.53
Sh3tc2Q80VA5 Gm28659-201ENSMUST00000188013 759 ntBASIC18.39■□□□□ 0.53
Sh3tc2Q80VA5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Sh3tc2Q80VA5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.39■□□□□ 0.53
Sh3tc2Q80VA5 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3tc2Q80VA5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3tc2Q80VA5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3tc2Q80VA5 Idnk-204ENSMUST00000226010 1898 ntBASIC18.39■□□□□ 0.53
Sh3tc2Q80VA5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3tc2Q80VA5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3tc2Q80VA5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Gm5864-201ENSMUST00000202263 970 ntBASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh3tc2Q80VA5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Birc2-201ENSMUST00000054878 378 ntBASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh3tc2Q80VA5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh3tc2Q80VA5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms