Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trim62Q80V85 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim62Q80V85 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim62Q80V85 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Trim62Q80V85 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim62Q80V85 Actl10-202ENSMUST00000226583 1501 ntBASIC17.52■□□□□ 0.39
Trim62Q80V85 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim62Q80V85 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim62Q80V85 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim62Q80V85 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim62Q80V85 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim62Q80V85 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim62Q80V85 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim62Q80V85 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim62Q80V85 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim62Q80V85 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim62Q80V85 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim62Q80V85 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Trim62Q80V85 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim62Q80V85 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim62Q80V85 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trim62Q80V85 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.51■□□□□ 0.39
Trim62Q80V85 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim62Q80V85 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim62Q80V85 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim62Q80V85 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.5■□□□□ 0.39
Trim62Q80V85 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim62Q80V85 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim62Q80V85 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim62Q80V85 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim62Q80V85 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim62Q80V85 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.5■□□□□ 0.39
Trim62Q80V85 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trim62Q80V85 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim62Q80V85 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim62Q80V85 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim62Q80V85 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim62Q80V85 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim62Q80V85 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trim62Q80V85 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim62Q80V85 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim62Q80V85 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.49■□□□□ 0.39
Trim62Q80V85 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim62Q80V85 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim62Q80V85 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trim62Q80V85 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim62Q80V85 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim62Q80V85 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trim62Q80V85 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim62Q80V85 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim62Q80V85 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim62Q80V85 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim62Q80V85 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim62Q80V85 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim62Q80V85 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim62Q80V85 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.48■□□□□ 0.39
Trim62Q80V85 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim62Q80V85 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim62Q80V85 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim62Q80V85 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim62Q80V85 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim62Q80V85 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim62Q80V85 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim62Q80V85 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim62Q80V85 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim62Q80V85 Gm26039-201ENSMUST00000158152 144 ntBASIC17.48■□□□□ 0.39
Trim62Q80V85 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim62Q80V85 Gm21559-201ENSMUST00000220638 855 ntBASIC17.48■□□□□ 0.39
Trim62Q80V85 Gm8587-201ENSMUST00000076538 843 ntBASIC17.48■□□□□ 0.39
Trim62Q80V85 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim62Q80V85 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.48■□□□□ 0.39
Trim62Q80V85 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim62Q80V85 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim62Q80V85 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim62Q80V85 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim62Q80V85 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim62Q80V85 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim62Q80V85 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim62Q80V85 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim62Q80V85 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim62Q80V85 Gm13186-201ENSMUST00000118031 316 ntBASIC17.47■□□□□ 0.39
Trim62Q80V85 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim62Q80V85 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.47■□□□□ 0.39
Trim62Q80V85 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.47■□□□□ 0.39
Trim62Q80V85 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim62Q80V85 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim62Q80V85 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim62Q80V85 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim62Q80V85 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim62Q80V85 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim62Q80V85 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.47■□□□□ 0.39
Trim62Q80V85 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim62Q80V85 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms