Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Gm35558-201ENSMUST00000222675 2219 ntBASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Gm18856-201ENSMUST00000178096 1374 ntBASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Gm5186-201ENSMUST00000218781 920 ntBASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Vps13bQ80TY5 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Gm6089-201ENSMUST00000197666 938 ntBASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Vps13bQ80TY5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Fst-202ENSMUST00000223640 2612 ntBASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Gm14701-201ENSMUST00000117156 348 ntBASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Gm27397-201ENSMUST00000184997 107 ntBASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Vps13bQ80TY5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Vps13bQ80TY5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Vps13bQ80TY5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Vps13bQ80TY5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC10.05□□□□□ -0.8
Vps13bQ80TY5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Vps13bQ80TY5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC10.05□□□□□ -0.8
Vps13bQ80TY5 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Vps13bQ80TY5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Vps13bQ80TY5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Vps13bQ80TY5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms