Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC26.19■■□□□ 1.78
Rpap1Q80TE0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Rpap1Q80TE0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC26.18■■□□□ 1.78
Rpap1Q80TE0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rpap1Q80TE0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rpap1Q80TE0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC26.18■■□□□ 1.78
Rpap1Q80TE0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC26.18■■□□□ 1.78
Rpap1Q80TE0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC26.18■■□□□ 1.78
Rpap1Q80TE0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rpap1Q80TE0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rpap1Q80TE0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Rpap1Q80TE0 Fam105a-203ENSMUST00000226170 3043 ntBASIC26.18■■□□□ 1.78
Rpap1Q80TE0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rpap1Q80TE0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Rpap1Q80TE0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Rpap1Q80TE0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rpap1Q80TE0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Rpap1Q80TE0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Rpap1Q80TE0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC26.17■■□□□ 1.78
Rpap1Q80TE0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rpap1Q80TE0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rpap1Q80TE0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Rpap1Q80TE0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Rpap1Q80TE0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rpap1Q80TE0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rpap1Q80TE0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rpap1Q80TE0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rpap1Q80TE0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
Rpap1Q80TE0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC26.16■■□□□ 1.78
Rpap1Q80TE0 Gm5264-201ENSMUST00000190584 848 ntBASIC26.16■■□□□ 1.78
Rpap1Q80TE0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC26.16■■□□□ 1.78
Rpap1Q80TE0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC26.16■■□□□ 1.78
Rpap1Q80TE0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rpap1Q80TE0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rpap1Q80TE0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Rpap1Q80TE0 AC159093.1-201ENSMUST00000227779 380 ntBASIC26.15■■□□□ 1.78
Rpap1Q80TE0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rpap1Q80TE0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Rpap1Q80TE0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rpap1Q80TE0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rpap1Q80TE0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Rpap1Q80TE0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
Rpap1Q80TE0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rpap1Q80TE0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rpap1Q80TE0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rpap1Q80TE0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Rpap1Q80TE0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC26.14■■□□□ 1.78
Rpap1Q80TE0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
Rpap1Q80TE0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rpap1Q80TE0 Gm27702-201ENSMUST00000184512 56 ntBASIC26.14■■□□□ 1.78
Rpap1Q80TE0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC26.14■■□□□ 1.78
Rpap1Q80TE0 CT009713.7-201ENSMUST00000224689 571 ntBASIC26.14■■□□□ 1.78
Rpap1Q80TE0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rpap1Q80TE0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Rpap1Q80TE0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Rpap1Q80TE0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Rpap1Q80TE0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
Rpap1Q80TE0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Rpap1Q80TE0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Rpap1Q80TE0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC26.14■■□□□ 1.77
Rpap1Q80TE0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Rpap1Q80TE0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rpap1Q80TE0 Gfra2-202ENSMUST00000227633 1480 ntBASIC26.13■■□□□ 1.77
Rpap1Q80TE0 Gm5953-201ENSMUST00000220644 2616 ntBASIC26.13■■□□□ 1.77
Rpap1Q80TE0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC26.13■■□□□ 1.77
Rpap1Q80TE0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC26.13■■□□□ 1.77
Rpap1Q80TE0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rpap1Q80TE0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rpap1Q80TE0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rpap1Q80TE0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Rpap1Q80TE0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Rpap1Q80TE0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Rpap1Q80TE0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC26.12■■□□□ 1.77
Rpap1Q80TE0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Rpap1Q80TE0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC26.12■■□□□ 1.77
Rpap1Q80TE0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Rpap1Q80TE0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
Rpap1Q80TE0 Gm4995-201ENSMUST00000117247 432 ntBASIC26.12■■□□□ 1.77
Rpap1Q80TE0 Gm2213-201ENSMUST00000197485 688 ntBASIC26.12■■□□□ 1.77
Rpap1Q80TE0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rpap1Q80TE0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rpap1Q80TE0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rpap1Q80TE0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rpap1Q80TE0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Rpap1Q80TE0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rpap1Q80TE0 Gm25990-201ENSMUST00000102440 86 ntBASIC26.11■■□□□ 1.77
Rpap1Q80TE0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rpap1Q80TE0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
Rpap1Q80TE0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rpap1Q80TE0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rpap1Q80TE0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Rpap1Q80TE0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Rpap1Q80TE0 Gm42670-201ENSMUST00000201816 1292 ntBASIC26.11■■□□□ 1.77
Rpap1Q80TE0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rpap1Q80TE0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Rpap1Q80TE0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rpap1Q80TE0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rpap1Q80TE0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rpap1Q80TE0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Rpap1Q80TE0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms