Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Mir8098-201ENSMUST00000184011 137 ntBASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox11Q7M6Y2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.06■□□□□ 0.32
Sox11Q7M6Y2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox11Q7M6Y2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Gm5864-201ENSMUST00000202263 970 ntBASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Sox11Q7M6Y2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 Gm13884-201ENSMUST00000118103 829 ntBASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox11Q7M6Y2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Sox11Q7M6Y2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox11Q7M6Y2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms