Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Gm16061-201ENSMUST00000122167 857 ntBASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lsm8Q6ZWM4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Gm13559-201ENSMUST00000120476 863 ntBASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Gm13474-201ENSMUST00000122466 815 ntBASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Gm7370-201ENSMUST00000219471 767 ntBASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.71■□□□□ 0.43
Lsm8Q6ZWM4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Lsm8Q6ZWM4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Lsm8Q6ZWM4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lsm8Q6ZWM4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm8Q6ZWM4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm8Q6ZWM4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lsm8Q6ZWM4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm8Q6ZWM4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm8Q6ZWM4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm8Q6ZWM4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Lsm8Q6ZWM4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.69■□□□□ 0.42
Lsm8Q6ZWM4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm8Q6ZWM4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lsm8Q6ZWM4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Gm10252-201ENSMUST00000209541 832 ntBASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.68■□□□□ 0.42
Lsm8Q6ZWM4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Lsm8Q6ZWM4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lsm8Q6ZWM4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Lsm8Q6ZWM4 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.67■□□□□ 0.42
Lsm8Q6ZWM4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms